Enumerate the instruments to event mappings
Source:R/redcap-event-instruments.R
redcap_event_instruments.RdExport the instrument-event mappings for a project (i.e., how the data collection instruments are designated for certain events in a longitudinal project). (Copied from "Export Instrument-Event Mappings" method of REDCap API documentation, v.10.5.1)
Usage
redcap_event_instruments(
redcap_uri,
token,
arms = NULL,
verbose = TRUE,
config_options = NULL,
handle_httr = NULL
)Arguments
- redcap_uri
The uri/url of the REDCap server typically formatted as "https://server.org/apps/redcap/api/". Required.
- token
The user-specific string that serves as the password for a project. Required.
- arms
A character string of arms to retrieve. Defaults to all arms of the project.
- verbose
A boolean value indicating if
messages should be printed to the R console during the operation. The verbose output might contain sensitive information (e.g. PHI), so turn this off if the output might be visible somewhere public. Optional.- config_options
A list of options passed to
httr::POST(). See details athttr::httr_options(). Optional.- handle_httr
The value passed to the
handleparameter ofhttr::POST(). This is useful for only unconventional authentication approaches. It should beNULLfor most institutions. Optional.
Value
Currently, a list is returned with the following elements,
data: Atibble::tibble()where each row represents one column in the REDCap dataset.success: A boolean value indicating if the operation was apparently successful.status_code: The http status code of the operation.outcome_message: A human readable string indicating the operation's outcome.elapsed_seconds: The duration of the function.raw_text: If an operation is NOT successful, the text returned by REDCap. If an operation is successful, theraw_textis returned as an empty string to save RAM.
References
The official documentation can be found on the 'API Help Page' and 'API Examples' pages on the REDCap wiki (i.e., https://community.projectredcap.org/articles/456/api-documentation.html and https://community.projectredcap.org/articles/462/api-examples.html). If you do not have an account for the wiki, please ask your campus REDCap administrator to send you the static material.
Examples
# \dontrun{
uri <- "https://redcap-dev-2.ouhsc.edu/redcap/api/"
# Longitudinal project with one arm
token_1 <- "76B4A71A0158BD34C98F10DA72D5F27C" # "arm-single-longitudinal" test project
REDCapR::redcap_arm_export(redcap_uri=uri, token=token_1)$data
#> The list of arms was retrieved from the REDCap project in 0.1 seconds. The http status code was 200.
#> # A tibble: 1 × 2
#> arm_number arm_name
#> <int> <chr>
#> 1 1 Arm 1
REDCapR::redcap_event_instruments(redcap_uri=uri, token=token_1)$data
#> 3 event instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
#> # A tibble: 3 × 3
#> arm_num unique_event_name form
#> <int> <chr> <chr>
#> 1 1 intake_arm_1 collection
#> 2 1 dischage_arm_1 collection
#> 3 1 follow_up_arm_1 collection
# Project with two arms
token_2 <- "DA6F2BB23146BD5A7EA3408C1A44A556" # "longitudinal" test project
REDCapR::redcap_arm_export(redcap_uri=uri, token=token_2)$data
#> The list of arms was retrieved from the REDCap project in 0.1 seconds. The http status code was 200.
#> # A tibble: 2 × 2
#> arm_number arm_name
#> <int> <chr>
#> 1 1 Drug A
#> 2 2 Drug B
REDCapR::redcap_event_instruments(redcap_uri=uri, token=token_2)$data
#> 25 event instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
#> # A tibble: 25 × 3
#> arm_num unique_event_name form
#> <int> <chr> <chr>
#> 1 1 enrollment_arm_1 demographics
#> 2 1 enrollment_arm_1 contact_info
#> 3 1 enrollment_arm_1 baseline_data
#> 4 1 dose_1_arm_1 patient_morale_questionnaire
#> 5 1 visit_1_arm_1 visit_lab_data
#> 6 1 visit_1_arm_1 patient_morale_questionnaire
#> 7 1 visit_1_arm_1 visit_blood_workup
#> 8 1 visit_1_arm_1 visit_observed_behavior
#> 9 1 dose_2_arm_1 patient_morale_questionnaire
#> 10 1 visit_2_arm_1 visit_lab_data
#> # ℹ 15 more rows
REDCapR::redcap_event_instruments(redcap_uri=uri, token=token_2, arms = c("1", "2"))$data
#> 25 event instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
#> # A tibble: 25 × 3
#> arm_num unique_event_name form
#> <int> <chr> <chr>
#> 1 1 enrollment_arm_1 demographics
#> 2 1 enrollment_arm_1 contact_info
#> 3 1 enrollment_arm_1 baseline_data
#> 4 1 dose_1_arm_1 patient_morale_questionnaire
#> 5 1 visit_1_arm_1 visit_lab_data
#> 6 1 visit_1_arm_1 patient_morale_questionnaire
#> 7 1 visit_1_arm_1 visit_blood_workup
#> 8 1 visit_1_arm_1 visit_observed_behavior
#> 9 1 dose_2_arm_1 patient_morale_questionnaire
#> 10 1 visit_2_arm_1 visit_lab_data
#> # ℹ 15 more rows
REDCapR::redcap_event_instruments(redcap_uri=uri, token=token_2, arms = "2")$data
#> 10 event instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
#> # A tibble: 10 × 3
#> arm_num unique_event_name form
#> <int> <chr> <chr>
#> 1 2 enrollment_arm_2 demographics
#> 2 2 enrollment_arm_2 contact_info
#> 3 2 enrollment_arm_2 baseline_data
#> 4 2 deadline_to_opt_ou_arm_2 contact_info
#> 5 2 first_dose_arm_2 patient_morale_questionnaire
#> 6 2 first_visit_arm_2 patient_morale_questionnaire
#> 7 2 first_visit_arm_2 visit_observed_behavior
#> 8 2 final_visit_arm_2 visit_observed_behavior
#> 9 2 final_visit_arm_2 completion_project_questionnaire
#> 10 2 deadline_to_return_arm_2 contact_info
# Classic project (without arms) throws an error
token_3 <- "9A068C425B1341D69E83064A2D273A70" # "simple" test project
REDCapR::redcap_arm_export(redcap_uri=uri, token=token_3)$data
#> A 'classic' REDCap project has no arms. Retrieved in 0.1 seconds. The http status code was 400.
#> # A tibble: 0 × 2
#> # ℹ 2 variables: arm_number <int>, arm_name <chr>
# REDCapR::redcap_event_instruments(redcap_uri=uri, token=token_3)$data
# }